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Thesis topic proposal
 
Bionformatic analysis of whole genome sequences of archaic samples

THESIS TOPIC PROPOSAL

Institute: University of Szeged
theoretical medicine
Doctoral School of Multidisciplinary Medical Scienses

Thesis supervisor: Zoltán Maróti
Location of studies (in Hungarian): SZTE ÁOK Gyermekgyógyászati Klinika
Abbreviation of location of studies: ÁOK


Description of the research topic:

In our recent project we will analyze 274 archaic whole genome sequences from Hun, Avar, Hungarian conquest age and 10th-12th century Hungarian samples. Our WGS sequences have mainly 2-6x average coverage thus besides the phylogenetic analyses (whole mitogenom typing, deep Y typing) it enables to perform various population genetic analyses (principal componens analysis (PCA), admixture, F statistics, qpAdm, etc). The aim of our project is to study the genetic composition of the Carpathian Basin from the 3rd to the 12th century. The PhD student will participate in the population genetic analyses and the establishment of the bioinformatic pipelines.

Required language skills: English B2 Level/TOEFL
Further requirements: 
TDK munka végzése

Number of students who can be accepted: 3

Deadline for application: 2020-08-31


2024. IV. 17.
ODT ülés
Az ODT következő ülésére 2024. június 14-én, pénteken 10.00 órakor kerül sor a Semmelweis Egyetem Szenátusi termében (Bp. Üllői út 26. I. emelet).

 
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