Attila Kertész-Farkas - ODT Personal data sheet


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Personal data sheet

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personal data approved: 2024. III. 22.

Personal data

name	Attila Kertész-Farkas
name of institution	University of Szeged
doctoral school	SzTE Doctoral School of Interdisciplinary Medicine (Academic staff member Az oktató a doktori iskola doktoranduszai számára oktat tantárgyat, és/vagy a doktori iskola megszavazta, hogy doktoranduszok számára kutatási témát írjon ki. )
the share of work in the different doctoral schools.	SzTE Doctoral School of Interdisciplinary Medicine 100%

Academic title
scientific degree, title	Ph.D.
year degree was obtained	2010
discipline to which degree belongs	computer sciences
institution granting the degree	SZTE
scientific degree, title	DSc abroad
year degree was obtained	2022
discipline to which degree belongs	mathematics and computing
institution granting the degree	HSE University
scientific degree, title	DSc
year degree was obtained	2024
discipline to which degree belongs	biology
institution granting the degree	HAS

Employment
2015 -	HSE University (research institute, not university) other (not specified) (Docent)

Thesis topic supervisor

number of doctoral students supervised until now

0.5

number of students who fulfilled course requirements

0.5

students who obtained their degrees:

(50%)

Nikita Moshkov

PhD

2022

IDS-SzTE

Research
research area	Machine Learning, Bioinformatics
research field in which current research is conducted	computer sciences

Publications

2021

Moshkov Nikita, Mathe Botond, Kertesz-Farkas Attila, Hollandi Reka, Horvath Peter: Test-time augmentation for deep learning-based cell segmentation on microscopy images (vol 10, 5068, 2020), SCIENTIFIC REPORTS 11: (1) 3327
type of document:
language: English
URL

2020

Sulimov Pavel, Voronkova Anastasia, Kertesz-Farkas Attila: Annotation of tandem mass spectrometry data using stochastic neural networks in shotgun proteomics, BIOINFORMATICS 36: (12) pp. 3781-3787.
type of document: Journal paper/Article
language: English
URL

2020

Sulimov Pavel, Kertesz-Farkas Attila: Tailor: A Nonparametric and Rapid Score Calibration Method for Database Search-Based Peptide Identification in Shotgun Proteomics, JOURNAL OF PROTEOME RESEARCH 19: (4) pp. 1481-1490.
type of document: Journal paper/Article
number of independent citations: 6
language: English
URL

2020

Moshkov Nikita, Mathe Botond, Kertesz-Farkas Attila, Hollandi Reka, Horvath Peter: Test-time augmentation for deep learning-based cell segmentation on microscopy images, SCIENTIFIC REPORTS 10: (1) 5068
type of document: Journal paper/Article
number of independent citations: 86
language: English
URL

2019

Danilova Yulia, Voronkova Anastasia, Sulimov Pavel, Kertesz-Farkas Attila: Bias in False Discovery Rate Estimation in Mass-Spectrometry-Based Peptide Identification, JOURNAL OF PROTEOME RESEARCH 18: (5) pp. 2354-2358.
type of document: Journal paper/Article
number of independent citations: 10
language: English
URL

2018

Chereshnev Roman, Kertesz-Farkas Attila: HuGaDB: Human Gait Database for Activity Recognition from Wearable Inertial Sensor Networks, In: Wasserman, S; Savchenko, AV; Pardalos, PM; Panchenko, A; Napoli, A; Loukachevitch, N; Lomazova, IA; Lempitsky, .; Kuznetsov, SO; Khachay, M; Ignatov, DI; VanDerAalst, WMP (szerk.) Analysis of Images, Social Networks and Texts: 6th International Conference, AIST 2017. Revised Selected Papers, Springer-Verlag (2018) pp. 131-141.
type of document: Part of book/Szaktanulmány (to be translated)
number of independent citations: 34
language: English
URL

2018

Filatov Gleb, Bauwens Bruno, Kertesz-Farkas Attila: LZW-Kernel: fast kernel utilizing variable length code blocks from LZW compressors for protein sequence classification, BIOINFORMATICS 34: (19) pp. 3281-3288.
type of document: Journal paper/Article
number of independent citations: 4
language: English
URL

2018

Chereshnev Roman, Kertesz-Farkas Attila: GaIn: Human Gait Inference for Lower Limbic Prostheses for Patients Suffering from Double Trans-Femoral Amputation, SENSORS 18: (12) 4146
type of document: Journal paper/Article
number of independent citations: 7
language: English
URL

2018

Chereshnev Roman, Kertesz-Farkas Attila: RapidHARe: A computationally inexpensive method for real-time human activity recognition from wearable sensors, JOURNAL OF AMBIENT INTELLIGENCE AND SMART ENVIRONMENTS 10: (5) pp. 377-391.
type of document: Journal paper/Article
number of independent citations: 5
language: English
URL

2015

Marini B, Kertesz-Farkas A, Ali H, Lucic B, Lisek K, Manganaro L, Pongor S, Luzzati R, Recchia A, Mavilio F, Giacca M, Lusic M: Nuclear architecture dictates HIV-1 integration site selection, NATURE 521: (7551) pp. 227-231.
type of document: Journal paper/Article
number of independent citations: 200
language: English
URL

Number of independent citations to these publications:

352

Scientometric data

list of publications and citations

number of scientific publications that meet accreditation criteria:

number of scientific publications:

monographs and professional books:

monographs/books in which chapters/sections were contributed:

number of independent citations to scientific publications and creative works:

688

2024. IV. 17.
ODT ülés
Az ODT következő ülésére 2024. június 14-én, pénteken 10.00 órakor kerül sor a Semmelweis Egyetem Szenátusi termében (Bp. Üllői út 26. I. emelet).