Lőrinc Sándor Pongor - ODT Personal data sheet


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Personal data sheet

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personal data approved: 2024. I. 06.

Personal data

name	Lőrinc Sándor Pongor
name of institution	University of Szeged
doctoral school	SzTE Doctoral School of Interdisciplinary Medicine (Supervisor Az oktató valamelyik doktori iskolában egy vagy több doktorandusz vagy doktorjelölt munkáját irányítja. ) SzTE Doctoral School of Biology (Academic staff member Az oktató a doktori iskola doktoranduszai számára oktat tantárgyat, és/vagy a doktori iskola megszavazta, hogy doktoranduszok számára kutatási témát írjon ki. )
the share of work in the different doctoral schools.	SzTE Doctoral School of Interdisciplinary Medicine 100%

Contact details
	own web page

Academic title
scientific degree, title	Ph.D.
year degree was obtained	2018
discipline to which degree belongs	theoretical medicine
institution granting the degree	Semmelweis University

Employment
2022 -	HCEMM other (not specified) (Csoportvezető)
2018 -	National Cancer Institute, NIH, Bethesda, MD, USA other (not specified) (Posztdoktor)

Thesis topic supervisor

number of doctoral students supervised until now

number of students who fulfilled course requirements

students who obtained their degrees:

present PhD students:

(50%)	Éva Magó	(PhD)	(2028/01)	IDS-SzTE
	Alexandra Ágnes Benő	(PhD)	(2027/08)	IDS-SzTE
	Kolos Nemes	(PhD)	(2027/01)	IDS-SzTE

Thesis topic proposals

Research
research area	Characterizing the epigenetik and genomic evolution of tumors
research field in which current research is conducted	general health sciences biology

Publications

2023

Pongor Lorinc Sandor, Schultz Christopher W, Rinaldi Lorenzo, Wangsa Darawalee, Redon Christophe E, Takahashi Nobuyuki, Fialkoff Gavriel, Desai Parth, Zhang Yang, Burkett Sandra, Hermoni Nadav, Vilk Noa, Gutin Jenia, Rona Gergely, Zhao Yongmei, Nichols Samantha, Vilimas Rasa, Sciuto Linda, Graham Chante, Caravaca Juan Manuel, Turan Sevilay, Shen Tsai-Wei, Rajapakse Vinodh N, Kumar Rajesh, Upadhyay Deep, Kumar Suresh, Kim Yoo Sun, Roper Nitin, Tran Bao, Hewitt Stephen M, Kleiner David E, Aladjem Mirit I, Friedman Nir, Hager Gordon L, Pommier Yves, Ried Thomas, Thomas Anish: Extrachromosomal DNA Amplification Contributes to Small Cell Lung Cancer Heterogeneity and is Associated with Worse Outcomes., CANCER DISCOVERY
type of document:
language: English
URL

2022

Pongor Lorinc S, Tlemsani Camille, Elloumi Fathi, Arakawa Yasuhiro, Jo Ukhyun, Gross Jacob M, Mosavarpour Sara, Varma Sudhir, Kollipara Rahul K, Roper Nitin, Teicher Beverly A, Aladjem Mirit I, Reinhold William, Thomas Anish, Minna John D, Johnson Jane E, Pommier Yves: Integrative epigenomic analyses of small cell lung cancer cells demonstrates the clinical translational relevance of gene body methylation., ISCIENCE 25: (11) p. 105338.
type of document: Journal paper/Article
language: English
URL

2021

Tlemsani Camille, Takahashi Nobuyuki, Pongor Lorinc, Rajapakse Vinodh N, Tyagi Manoj, Wen Xinyu, Fasaye Grace-Ann, Schmidt Keith T, Desai Parth, Kim Chul, Rajan Arun, Swift Shannon, Sciuto Linda, Vilimas Rasa, Webb Santhana, Nichols Samantha, Figg William Douglas, Pommier Yves, Calzone Kathleen, Steinberg Seth M, Wei Jun S, Guha Udayan, Turner Clesson E, Khan Javed, Thomas Anish: Whole-exome sequencing reveals germline-mutated small cell lung cancer subtype with favorable response to DNA repair-targeted therapies., SCIENCE TRANSLATIONAL MEDICINE 13: (578) eabc7488
type of document: Journal paper/Article
number of independent citations: 9
language: English
URL

2020

Murai Junko, Zhang Hongliang, Pongor Lorinc, Tang Sai-Wen, Jo Ukhyun, Moribe Fumiya, Ma Yixiao, Tomita Masaru, Pommier Yves: Chromatin Remodeling and Immediate Early Gene Activation by SLFN11 in Response to Replication Stress, CELL REPORTS 30: (12) pp. 4137-4151.e6.
type of document: Journal paper/Article
number of independent citations: 14
language: English
URL

2020

Pongor L.S., Munkácsy G., Vereczkey I., Pete I., Győrffy B.: Currently favored sampling practices for tumor sequencing can produce optimal results in the clinical setting, SCIENTIFIC REPORTS 10: (1) 14403
type of document: Journal paper/Article
number of independent citations: 4
language: English
URL

2020

Tlemsani Camille, Pongor Lorinc, Elloumi Fathi, Girard Luc, Huffman Kenneth E, Roper Nitin, Varma Sudhir, Luna Augustin, Rajapakse Vinodh N, Sebastian Robin, Kohn Kurt W, Krushkal Julia, Aladjem Mirit I, Teicher Beverly A, Meltzer Paul S, Reinhold William C, Minna John D, Thomas Anish, Pommier Yves: SCLC-CellMiner, CELL REPORTS 33: (3) p. 108296.
type of document: Journal paper/Article
number of independent citations: 24
language: English
URL

2020

Pongor Lorinc S., Gross Jacob M., Vera Alvarez Roberto, Murai Junko, Jang Sang-Min, Zhang Hongliang, Redon Christophe, Fu Haiqing, Huang Shar-Yin, Thakur Bhushan, Baris Adrian, Marino-Ramirez Leonardo, Landsman David, Aladjem Mirit I., Pommier Yves: BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks, EPIGENETICS & CHROMATIN 13: (1) 21
type of document: Journal paper/Article
number of independent citations: 7
language: English
URL

2019

Vera Alvarez Roberto, Pongor Lorinc Sandor, Mariño-Ramírez Leonardo, Landsman David: TPMCalculator, BIOINFORMATICS 35: (11) pp. 1960-1962.
type of document: Journal paper/Article
number of independent citations: 69
language: English
URL

2018

Patten DK, Corleone G, Gyorffy B, Perone Y, Slaven N, Barozzi I, Erdos E, Saiakhova A, Goddard K, Vingiani A, Shousha S, Pongor LS, Hadjiminas DJ, Schiavon G, Barry P, Palmieri C, Coombes RC, Scacheri P, Pruneri G, Magnani L: Enhancer mapping uncovers phenotypic heterogeneity and evolution in patients with luminal breast cancer, NATURE MEDICINE 24: (9) pp. 1469-1480.
type of document: Journal paper/Article
number of independent citations: 61
language: English
URL

2015

Pongor L, Kormos M, Hatzis C, Pusztai L, Szabo A, Gyorffy B: A genome-wide approach to link genotype to clinical outcome by utilizing next generation sequencing and gene chip data of 6,697 breast cancer patients., GENOME MEDICINE 7: (1) 104
type of document: Journal paper/Article
number of independent citations: 45
language: English
URL

Number of independent citations to these publications:

233

Scientometric data

list of publications and citations

number of scientific publications that meet accreditation criteria:

number of scientific publications:

monographs and professional books:

monographs/books in which chapters/sections were contributed:

scientific publications published abroad that meet the accreditation criteria:

publications not in Hungarian, published in Hungary, meeting the accreditation criteria:

number of independent citations to scientific publications and creative works:

755

Supervision
thesis supervisor	Balázs Győrffy
one supervisor or with co-supervisor	individual
degree	PhD
starting of doctoral studies	2014
date of final certificate (year,month)	2017/08
year in which degree was obtained	2018
diszertáció	Main findings in the thesis (in Hungarian)Main findings in the thesis (in English)The thesis
data of the public discussion	defense

2024. IV. 17.
ODT ülés
Az ODT következő ülésére 2024. június 14-én, pénteken 10.00 órakor kerül sor a Semmelweis Egyetem Szenátusi termében (Bp. Üllői út 26. I. emelet).